Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015933980.1_cds_XP_016480124.1_71597
CDS Infomation

[gene=LOC107801331] [db_xref=GeneID:107801331] [protein=pollen receptor-like kinase 1] [protein_id=XP_016480124.1] [location=complement(join(114043..114641,114792..115547,116535..117438))] [gbkey=CDS]
Sequence

ATGGTTAGAGAGGTGTGCAGTGCTTATGCCTCAAATTGTGGTTTGTTGTGGGTAGCCAAA
AGAAGGATGATGACGGAGGTGCAAGATGCCGGCCGGCCACCAGTGCTTGTTTACGGAGAT
CCGCAGCGAGAAGCAGAAGCACCCATTACCTCGTTTGCATGTTCTTCATCATCAAGATCA
AGATCATGCTTTCGTCACATGATCATTTTCCTTCTTCTTGTGTCATTCACATTTGTATCG
GCTCAACCTGCAGCAGTAGATGTGGACGACGACCCCACAGATAAAACAGATCATCTTCCA
GATGCAAAGAGCTCTTCCGAGGCTCTCCTCAACTTCAAAAGCTCGTTATCTATATCTTCA
GCTAAAGGACGGGAGGTACTTGGGTCTTGGGTTCCATCCGTAAGTCCATGTAATGGGAAC
ATTGAGAACTGGTCTGGAGTGATTTGCTTTGAAGGGGATGTATGGGGTTTGAGACTTGAG
GACTTGGACCTGTCCGGGGTGATTGATATAGATTCCCTGCTTCCGTTGCATTTCCTACGG
ACCCTGAGCTTTATGAACAACAGCTTCAAGGGAGCAATGCCTGATTGGAATAAACTCGGT
GCGCTCAAGTCGTTGTACTTGTCCAATAATAGCTTTTCCGGTCAAATCCCGGATGATGCT
TTCAAGGGTATGACTTATCTCAAGAAATTGTATTTAGCCGACAACCAATTCACAGGCAAG
ATTCCCACCTCCCTGGCTACCTCCTGCCCCAGGCTCTTCGAGTTGAGGCTCGAAAATAAT
AGATTCAGTGGCTCTATACCTGATTTTCCCCGGGACGTTCTCAAACTCTTCAACGTATCC
AACAACCAACTCGAGGGACCAATCCCTCCCTCTCTTTCTTTAATGGATCCAACAACATTC
TCAGGGAACAAAGGTCTGTGTGGGAAGCCATTGGAATCTGCAGCTTGCAACTTCCCAAGT
CCAGAAGCAGATACTCCCAACAGTCTCAACTCCACGGTCAGCGGCCAATCTGGTGATATA
ATTAGGAAGTCGCCCTCTCTTCTGAGTAGAGTGATGTTGATCGTTGCAATTTGTTTGGTG
GTCTTATGTCTCATGATTGTGCTAATTCTTATTATTTGCCGCCGTAGCCATAGCAGCAGC
CAAAGTAATCAACAAGTAGGTCGGGCTGTTGATTACTCGAATATTGATGGGGATCAAAGT
GCCTTTACATCATCAACGTCAGCTCCTGATGTGATAATGAGCGGCAACCTGCCAACTTAC
CCAAGACACGATAATAACCATTCAAATAGTACTATTAACAATAACAAGGCATTAGAGGCA
CCAGCAGGAGCAGCGGTAGTAGGTAAGTTGTCATTCGTTAGAGATGACAGGCCACGATTT
GATCTACAGGATTTGCTAAGAGCATCAGCGGAGGTGCTTGGGAGTGGGAACCTGGGGTCC
TCTTATAAGGCTCTACTTATGGATGGCCAAGCCGTGGTGGTGAAGAGGTTTAAGCAAACG
AACCATGTCGCAAAAGAAGATTTCCACGAGCACATGAGGAGGTTAGGTAGACTAAGCCAC
CCCAACCTACTCCCCCTTGTGGCCTATTATTACAGAAAAGAAGAGAAGCTGCTTGTGTAT
GACTACGCCTCCAATGGTAGCTTGGCCAGTCACCTTCATGGCAATCAGTCTAGGCTGGAG
TGGTCAAGACGCTTGAAAATCATAAAAGGAGTTGCAAAGGCCTTGGCCTACCTTCACAAT
GAGCTGCCAAGCCTAGCACTTCCGCATGGTCACCTCAAGTCATCGAATGTGCTTTTGGAC
AAATCTTTTAATCCCGTGTTGATGGATTACACATTAGTGCCTCTGGTGAATCTTGCGCAA
GTACAACATCTTCTAGTGGCTTACAAAGCACCGGAGTACGCACAACAAGGCCGCGTCACG
AGGAAGACTGATGTTTGGAGCCTTGGGATTCTAATACTAGAAACCCTGACAGGCAAGTTC
CCCACAAACTACCTCGCTCTCAGCACTGGCTATGGTACCGAATTGGCTACTTGGGTCGAC
TCCATTATTAAAGATAATGAGTTAGCTTTTGATAAAGAGATGGACAGTACAGAGGATAGC
CAACAACAGATCCGAAAGCTCTTCAACATCGGAGTGGCTTGTTGTCAAGAAGATTTGGAT
ACAAGGTGGGGTCTGAAGGAAGCTGTTGAAAGTATACAAGGCTTAAATGAGAAGGACGAC
GCCGACGGCAACAGCGATCAAATTGATGTTGGAGTTTGA

Peptide Sequence

PEP ID

XP_016480124.1
PEP Infomation

PREDICTED: pollen receptor-like kinase 1 [Nicotiana tabacum]
Sequence

MVREVCSAYASNCGLLWVAKRRMMTEVQDAGRPPVLVYGDPQREAEAPITSFACSSSSRS
RSCFRHMIIFLLLVSFTFVSAQPAAVDVDDDPTDKTDHLPDAKSSSEALLNFKSSLSISS
AKGREVLGSWVPSVSPCNGNIENWSGVICFEGDVWGLRLEDLDLSGVIDIDSLLPLHFLR
TLSFMNNSFKGAMPDWNKLGALKSLYLSNNSFSGQIPDDAFKGMTYLKKLYLADNQFTGK
IPTSLATSCPRLFELRLENNRFSGSIPDFPRDVLKLFNVSNNQLEGPIPPSLSLMDPTTF
SGNKGLCGKPLESAACNFPSPEADTPNSLNSTVSGQSGDIIRKSPSLLSRVMLIVAICLV
VLCLMIVLILIICRRSHSSSQSNQQVGRAVDYSNIDGDQSAFTSSTSAPDVIMSGNLPTY
PRHDNNHSNSTINNNKALEAPAGAAVVGKLSFVRDDRPRFDLQDLLRASAEVLGSGNLGS
SYKALLMDGQAVVVKRFKQTNHVAKEDFHEHMRRLGRLSHPNLLPLVAYYYRKEEKLLVY
DYASNGSLASHLHGNQSRLEWSRRLKIIKGVAKALAYLHNELPSLALPHGHLKSSNVLLD
KSFNPVLMDYTLVPLVNLAQVQHLLVAYKAPEYAQQGRVTRKTDVWSLGILILETLTGKF
PTNYLALSTGYGTELATWVDSIIKDNELAFDKEMDSTEDSQQQIRKLFNIGVACCQEDLD
TRWGLKEAVESIQGLNEKDDADGNSDQIDVGV

Transcript Sequence

Gene sequence data has not been registered.